Package: rcaiman 2.0.1

Gastón Mauro Díaz

rcaiman: CAnopy IMage ANalysis

Tools for preprocessing and processing canopy photographs with support for raw data reading. Provides methods to address variability in sky brightness and to mitigate errors from image acquisition in non-diffuse light. Works with all types of fish-eye lenses, and some methods also apply to conventional lenses.

Authors:Gastón Mauro Díaz [aut, cre]

rcaiman_2.0.1.tar.gz
rcaiman_2.0.1.zip(r-4.7)rcaiman_2.0.1.zip(r-4.6)rcaiman_2.0.1.zip(r-4.5)
rcaiman_2.0.1.tgz(r-4.6-any)rcaiman_2.0.1.tgz(r-4.5-any)
rcaiman_2.0.1.tar.gz(r-4.7-any)rcaiman_2.0.1.tar.gz(r-4.6-any)
rcaiman_2.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
rcaiman/json (API)
NEWS

# Install 'rcaiman' in R:
install.packages('rcaiman', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gastonmaurodiaz/rcaiman/issues

Datasets:

On CRAN:

Conda:

archivedpackagesr-universe

1.70 score 5 stars 2 scripts 163 downloads 69 exports 75 dependencies

Last updated from:7aa8c14866 (on package/rcaiman). Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK320
source / vignettesOK428
linux-release-x86_64OK315
macos-release-arm64OK281
macos-oldrel-arm64OK158
windows-develOK257
windows-releaseOK236
windows-oldrelOK223
wasm-releaseOK211

Exports:apply_by_directionazimuth_imagebinarize_by_regionbinarize_with_thrcalc_diametercalc_relative_radiuscalc_spherical_distancecalc_zenith_colrowcalibrate_lenschessboardcie_imagecomplementary_gradientscompute_canopy_opennessconventional_lens_imagecorrect_vignettingcrop_caimcrosscalibrate_lensdefuzzifydisplay_caimestimate_sun_anglesexpand_noncircularextract_dnextract_featureextract_radiometryextract_rrextract_sky_pointsfisheye_to_equidistantfisheye_to_panofit_cie_modelfit_coneshaped_modelgrow_blackhsp_read_manual_inputhsp_read_opt_sky_coefhsp_write_sky_pointshsp_write_sun_coordinterpolate_planarinterpolate_sphericalinvert_gamma_correctionlensnormalize_minmaxootb_binootb_sky_aboveootb_sky_cieoptim_dist_to_blackoptim_sun_anglespaint_with_maskpolar_qtreeread_binread_caimread_caim_rawread_sky_cierem_isolated_black_pixelsrem_nearby_pointsrem_outliersring_segmentationrow_col_from_zenith_azimuthsector_segmentationselect_sky_regionsky_grid_centerssky_grid_segmentationtest_lens_coefthr_isodatathr_mbltthr_twocornervalidate_cie_modelwrite_binwrite_sky_ciezenith_azimuth_from_row_colzenith_image

Dependencies:abindbase64encBHbriobslibcachemcallrclassclassIntclicodetoolscrayondata.tableDBIdescdiffobjdigestdoParallele1071evaluatefastmapfilenamerfontawesomeforeachfsgluehighrhtmltoolshtmlwidgetsiteratorsjquerylibjsonliteKernSmoothknitrlazyevallidRlifecyclemagrittrMASSmemoisemimeotelparallellypkgbuildpkgloadpracmapraiseprocessxproxypsR6rappdirsrbibutilsRcppRcppArmadilloRdpackrglrlangrlasrmarkdownrprojroots2sasssfspatialstarsterratestthattinytexunitswaldowithrwkxfunyaml

Readme and manuals

Help Manual

Help pageTopics
Apply a method by direction using a constant field of viewapply_by_direction
Build azimuth imageazimuth_image
Regional thresholding of greyscale imagesbinarize_by_region
Binarize with known thresholdsbinarize_with_thr
Calculate diametercalc_diameter
Calculate relative radiuscalc_relative_radius
Calculate spherical distancecalc_spherical_distance
Calculate zenith raster coordinatescalc_zenith_colrow
Calibrate lenscalibrate_lens
Perform chessboard segmentationchessboard
CIE sky imagecie_image
Set of 15 CIE Standard Skiescie_table
Calculate complementary gradientscomplementary_gradients
Calculate canopy opennesscompute_canopy_openness
Generate conventional-lens-like imageconventional_lens_image
Correct vignetting effectcorrect_vignetting
Crop a canopy imagecrop_caim
Cross-calibrate lenscrosscalibrate_lens
Defuzzify a fuzzy classificationdefuzzify
Display a canopy imagedisplay_caim
Estimate sun angular coordinatesestimate_sun_angles
Expand non-circularexpand_noncircular
Extract digital numbers from sky pointsextract_dn
Extract featureextract_feature
Extract radiometry data for calibrationextract_radiometry
Extract digital numbers at sky points and normalize by estimated zenith radianceextract_rr
Extract sky pointsextract_sky_points
Fisheye to equidistantfisheye_to_equidistant
Fisheye to panoramicfisheye_to_pano
Fit CIE sky modelfit_cie_model
Fit cone-shaped modelfit_coneshaped_model
Fit a trend surface to sky digital numbersfit_trend_surface
Grow black regions in a binary maskgrow_black
HSP compatibility functionshsp_compat hsp_read_manual_input hsp_read_opt_sky_coef hsp_write_sky_points hsp_write_sun_coord
Interpolate in planar spaceinterpolate_planar
Interpolate in spherical spaceinterpolate_spherical
Gamma back correction of JPEG imagesinvert_gamma_correction
Access the lens databaselens
Normalize data using min-max rescalingnormalize_minmax
Out-of-the-box reliable binarized imageootb_bin
Out-of-the-box above-canopy skyootb_sky_above
Out-of-the-box CIE sky model and rasterootb_sky_cie
Optimize minimum distance to black pixelsoptim_dist_to_black
Optimize sun angular coordinatesoptim_sun_angles
Paint with maskpaint_with_mask
Generate polar quadtree segmentationpolar_qtree
Write and read binarized imagesread_bin write_bin
Read a canopy image from a fileread_caim
Read a canopy image from a raw fileread_caim_raw
Remove isolated black pixelsrem_isolated_black_pixels
Remove nearby sky pointsrem_nearby_points
Remove statistical outliers in sky pointsrem_outliers
Assign zenith-ring labelsring_segmentation
Assign azimuth-sector labelssector_segmentation
Select sky regionselect_sky_region
Map sky-grid centers to raster coordinatessky_grid_centers
Assign sky-grid labelssky_grid_segmentation
Test lens projection functiontest_lens_coef
Compute IsoData thresholdthr_isodata
Compute model-based thresholdsthr_mblt
Compute two-corner thresholdsthr_twocorner
Validate CIE sky modelsvalidate_cie_model
Write canopy imagewrite_caim
Write and read out-of-the-box CIE sky model and rasterread_sky_cie write_sky_cie
Map between zenith–azimuth angles and raster coordinatesrow_col_from_zenith_azimuth zenith_azimuth_from_row_col
Build Zenith imagezenith_image