Vignette for the Package: permRand | Example Use of Package Functions | Step 1: Generate a Test Dataset | Step 2: Format Datasets | Step 3: Randomize Dataset | Step 4: Check the Randomization | Step 5: Packing Lists From the Randomization Results | Step 6: Switching Without Re-Randomization | Step 7: Checking the Results | Step 8: Output the Packing Lists for the switchR Function
This package is considered a duplicate. The official version of this package is found at:https://m-mellers.r-universe.dev/permRand
Package: permRand 1.0.0
Michelle Mellers
permRand: Permutation Randomization
Provides randomization using permutation for applications. To provide a Quality Control (QC) check, QC samples can be randomized within strata. A second function allows for the ability to ”switch” samples to meet set requirements and perform a certain amount of minimization on these switches. The functions are flexible for users by specifying strata size and number of QC samples per strata. The randomization meets the following requirements • QC sample requirements: QC samples not adjacent, QC samples from same mother must follow certain patterns. • Matched sample sets must be within a single strata, and next to each other.
Authors:
permRand_1.0.0.tar.gz
permRand_1.0.0.zip(r-4.7-any)permRand_1.0.0.zip(r-4.6-any)permRand_1.0.0.zip(r-4.5-any)
permRand_1.0.0.tgz(r-4.6-any)permRand_1.0.0.tgz(r-4.5-any)
permRand_1.0.0.tar.gz(r-4.7-any)permRand_1.0.0.tar.gz(r-4.6-any)
permRand_1.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
permRand/json (API)
| # Install 'permRand' in R: |
| install.packages('permRand', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/m-mellers/permrand/issues
Datasets:
- emptyQC - A dataset containing locations of empty QC samples.
- motherQC - A dataset containing locations of the mother QC samples.
- QCMaster - A dataset containing QC sample IDs and packing location.
- serumIDs - A dataset containing serum sample IDs linked with studyIDs.
- serumLoc - A dataset containing the a packing list with serum samples.
- serumMaster3 - A dataset containing information for QC and serum samples.
- serumRand - A dataset containing randomized QC and serum samples.
- serumSwitch - A dataset containing switched and randomized QC and serum samples.
- serumSwitchP - A dataset containing switched and randomized QC and serum samples with packing locations.
- testR - A dataset containing the example non-randomized serum sample file.
Last updated from:8ab6a19813 (on package/permRand). Checks:9 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 147 | ||
| source / vignettes | OK | 202 | ||
| linux-release | OK | 130 | ||
| macos-release | OK | 107 | ||
| macos-oldrel | OK | 121 | ||
| windows-devel | OK | 91 | ||
| windows-release | OK | 90 | ||
| windows-oldrel | OK | 82 | ||
| wasm-release | OK | 103 |
Exports:allRandbatchCountcountQCformatRandorderCasesoutputLabrandTestswitchRtestCCAcrosstestPairtestQCmatchtestRanduniqueID
Dependencies:clicpp11dplyrgenericsgluelifecyclemagrittrpillarpkgconfigpurrrR6rlangstringistringrtibbletidyrtidyselectutf8vctrswithr
