Package: klic 1.0.4

Alessandra Cabassi

klic: Kernel Learning Integrative Clustering

Kernel Learning Integrative Clustering (KLIC) is an algorithm that allows to combine multiple kernels, each representing a different measure of the similarity between a set of observations. The contribution of each kernel on the final clustering is weighted according to the amount of information carried by it. As well as providing the functions required to perform the kernel-based clustering, this package also allows the user to simply give the data as input: the kernels are then built using consensus clustering. Different strategies to choose the best number of clusters are also available. For further details please see Cabassi and Kirk (2020) <doi:10.1093/bioinformatics/btaa593>.

Authors:Alessandra Cabassi [aut, cre], Paul DW Kirk [ths], Mehmet Gonen [ctb]

klic_1.0.4.tar.gz
klic_1.0.4.zip(r-4.7)klic_1.0.4.zip(r-4.6)klic_1.0.4.zip(r-4.5)
klic_1.0.4.tgz(r-4.6-any)klic_1.0.4.tgz(r-4.5-any)
klic_1.0.4.tar.gz(r-4.7-any)klic_1.0.4.tar.gz(r-4.6-any)
klic_1.0.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
klic/json (API)

# Install 'klic' in R:
install.packages('klic', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/acabassi/klic/issues

On CRAN:

Conda:

archivedpackagesr-universe

3.51 score 5 stars 13 scripts 228 downloads 1 mentions 7 exports 88 dependencies

Last updated from:abf4550265 (on package/klic). Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK134
source / vignettesOK233
linux-release-x86_64OK133
macos-release-arm64OK102
macos-oldrel-arm64OK94
windows-develOK86
windows-releaseOK75
windows-oldrelOK76
wasm-releaseOK119

Exports:copheneticCorrelationkkmeanskliclmkkmeanslmkkmeans_missingDataplotSimilarityMatrixspectrumShift

Dependencies:caretclasscliclockclustercocacodetoolscpp11data.tableDEoptimRdiagramdigestdiptestdplyre1071farverflexmixforeachfpcfuturefuture.applygenericsggplot2glmnetglobalsgluegowergtablehardhatipredisobanditeratorskernlabKernSmoothlabelinglatticelavalifecyclelistenvlubridatemagrittrMASSMatrixmclustModelMetricsmodeltoolsnlmennetnumDerivparallellypheatmappillarpkgconfigplyrprabcluspROCprodlimprogressrproxypurrrR6RColorBrewerRcppRcppEigenrecipesreshape2rlangrobustbaserpartS7scalesshapesparclsparsevctrsSQUAREMstringistringrsurvivaltibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithr

Introduction to klic

Rendered fromklic-vignette.Rmdusingknitr::rmarkdownon Jun 11 2026.

Last update: 2026-06-11
Started: 2026-06-11