Package: bold 1.3.0

Salix Dubois

bold: Interface to Bold Systems API

A programmatic interface to the Web Service methods provided by Bold Systems (<http://www.boldsystems.org/>) for genetic 'barcode' data. Functions include methods for searching by sequences by taxonomic names, ids, collectors, and institutions; as well as a function for searching for specimens, and downloading trace files.

Authors:Salix Dubois [aut, cre], Scott Chamberlain [aut]

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bold/json (API)
NEWS

# Install 'bold' in R:
install.packages('bold', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ropensci/bold/issues

Datasets:
  • sequences - List of 3 nucleotide sequences to use in examples for the 'bold_identify' function

On CRAN:

biodiversitybarcodednasequencesfastaarchivedpackagesr-universe

18 exports 5 stars 4.48 score 14 dependencies 32 dependents 9 mentions 51 scripts 4.3k downloads

Last updated 22 days agofrom:1d227dedf0 (on package/bold). Checks:OK: 7. Indexed: no.

TargetResultDate
Doc / VignettesOKAug 26 2024
R-4.5-winOKAug 26 2024
R-4.5-linuxOKAug 26 2024
R-4.4-winOKAug 26 2024
R-4.4-macOKAug 26 2024
R-4.3-winOKAug 26 2024
R-4.3-macOKAug 26 2024

Exports:b_sepFastabold_filterbold_get_attrbold_get_errorsbold_get_paramsbold_identifybold_identify_parentsbold_identify_taxonomybold_read_tracebold_seqbold_seqspecbold_specimensbold_statsbold_tax_idbold_tax_id2bold_tax_namebold_traceread_trace

Dependencies:clicrulcurldata.tablehttpcodejsonlitemimeR6Rcpprlangstringitriebeardurltoolsxml2