Package: blit 0.2.0

Yun Peng

blit: Bioinformatics Library for Integrated Tools

An all-encompassing R toolkit designed to streamline the process of calling various bioinformatics software and then performing data analysis and visualization in R. With 'blit', users can easily integrate a wide array of bioinformatics command line tools into their workflows, leveraging the power of R for sophisticated data manipulation and graphical representation.

Authors:Yun Peng [aut, cre], Shixiang Wang [aut], Jennifer Lu [cph], Li Song [cph], X. Shirley Liu [cph]

blit_0.2.0.tar.gz
blit_0.2.0.zip(r-4.7)blit_0.2.0.zip(r-4.6)blit_0.2.0.zip(r-4.5)
blit_0.2.0.tgz(r-4.6-any)blit_0.2.0.tgz(r-4.5-any)
blit_0.2.0.tar.gz(r-4.7-any)blit_0.2.0.tar.gz(r-4.6-any)
blit_0.2.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
blit/json (API)

# Install 'blit' in R:
install.packages('blit', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wanglabcsu/blit/issues

On CRAN:

Conda:

archivedpackagesr-universe

3.18 score 5 stars 2 packages 6 scripts 243 downloads 37 exports 5 dependencies

Last updated from:f26cbd0fde (on package/blit). Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK118
source / vignettesOK170
linux-release-x86_64OK116
macos-release-arm64OK104
macos-oldrel-arm64OK95
windows-develOK75
windows-releaseOK89
windows-oldrelOK85
wasm-releaseOK93

Exports:allele_counterappmambaappmamba_rcargarg0cellrangercmd_backgroundcmd_condacmd_envpathcmd_envvarcmd_helpcmd_on_exitcmd_on_failcmd_on_startcmd_on_succeedcmd_parallelcmd_runcmd_wdCommandcondaexecfastq_pairfastq_read_pairgistic2install_appmambakraken_toolskraken2make_commandperlpyscenicpythonsamtoolsseqkittrust4trust4_gene_namestrust4_imgt_annotuninstall_appmamba

Dependencies:cliprocessxpsR6rlang