Package: LPKsample 2.1
LPKsample: LP Nonparametric High Dimensional K-Sample Comparison
LP nonparametric high-dimensional K-sample comparison method that includes (i) confirmatory test, (ii) exploratory analysis, and (iii) options to output a data-driven LP-transformed matrix for classification. The primary reference is Mukhopadhyay, S. and Wang, K. (2020, Biometrika); <arxiv:1810.01724>.
Authors:
LPKsample_2.1.tar.gz
LPKsample_2.1.zip(r-4.7)LPKsample_2.1.zip(r-4.6)LPKsample_2.1.zip(r-4.5)
LPKsample_2.1.tgz(r-4.6-any)LPKsample_2.1.tgz(r-4.5-any)
LPKsample_2.1.tar.gz(r-4.7-any)LPKsample_2.1.tar.gz(r-4.6-any)
LPKsample_2.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
LPKsample/json (API)
| # Install 'LPKsample' in R: |
| install.packages('LPKsample', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cranhaven/cranhaven.r-universe.dev/issues
- leukemia - Leukemia cancer gene expression data
Last updated from:c493d87788 (on package/LPKsample). Checks:9 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 146 | ||
| source / vignettes | OK | 197 | ||
| linux-release-x86_64 | OK | 146 | ||
| macos-release-arm64 | OK | 134 | ||
| macos-oldrel-arm64 | OK | 141 | ||
| windows-devel | OK | 92 | ||
| windows-release | OK | 101 | ||
| windows-oldrel | OK | 93 | ||
| wasm-release | OK | 120 |
Exports:GLPgraph.clust.testLP.comeanLP.PolyLPTW.Gen
Dependencies:abindapclusterbackportsbootbroomcarcarDataclicolorspacecowplotcpp11DerivdoBydplyrfarverforecastFormulafracdiffgenericsggplot2gluegtableigraphisobandlabelinglatticelifecyclelme4lmtestLPGraphmagrittrMASSMatrixMatrixModelsmclustmgcvmicrobenchmarkminqamodelrnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigPMApurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasrlangS7scalesSparseMstringistringrsurvivaltibbletidyrtidyselecttimeDateurcautf8vctrsviridisLitewithrzoo
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| LP Nonparametric High Dimensional K-Sample Comparison | LPKsample-package LPKsample |
| A function to perform K-sample test using GLP algorithm | GLP graph.clust.test |
| Leukemia cancer gene expression data | leukemia |
| Function to find LP-comeans | LP.comean |
| eLP Transformation | LP.Poly LPT |
| Similarity matrix based on eLP basis and polynomial kernel | W.Gen |
