Package: AntAngioCOOL 1.2

Javad Zahiri

AntAngioCOOL: Anti-Angiogenic Peptide Prediction

Machine learning based package to predict anti-angiogenic peptides using heterogeneous sequence descriptors. 'AntAngioCOOL' exploits five descriptor types of a peptide of interest to do prediction including: pseudo amino acid composition, k-mer composition, k-mer composition (reduced alphabet), physico-chemical profile and atomic profile. According to the obtained results, 'AntAngioCOOL' reached to a satisfactory performance in anti-angiogenic peptide prediction on a benchmark non-redundant independent test dataset.

Authors:Babak Khorsand <[email protected]>

AntAngioCOOL_1.2.tar.gz
AntAngioCOOL_1.2.zip(r-4.7-any)AntAngioCOOL_1.2.zip(r-4.6-any)AntAngioCOOL_1.2.zip(r-4.5-any)
AntAngioCOOL_1.2.tgz(r-4.6-any)AntAngioCOOL_1.2.tgz(r-4.5-any)
AntAngioCOOL_1.2.tar.gz(r-4.7-any)AntAngioCOOL_1.2.tar.gz(r-4.6-any)
AntAngioCOOL_1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
AntAngioCOOL/json (API)

# Install 'AntAngioCOOL' in R:
install.packages('AntAngioCOOL', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/cranhaven/cranhaven.r-universe.dev/issues

Uses libs:
  • openjdk– OpenJDK Java runtime, using Hotspot JIT

On CRAN:

Conda:

archivedpackagesr-universeopenjdk

2.00 score 5 stars 1 scripts 389 downloads 2 mentions 1 exports 76 dependencies

Last updated from:25611c2a96 (on package/AntAngioCOOL). Checks:7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develNOTE243
source / vignettesOK226
linux-releaseNOTE234
macos-releaseNOTE175
macos-oldrelNOTE214
windows-develNOTE213
windows-releaseNOTE183
windows-oldrelNOTE183
wasm-releaseOK122

Exports:AntAngioCOOL

Dependencies:caretclasscliclockcodetoolscpp11data.tablediagramdigestdplyre1071farverforeachfuturefuture.applygenericsggplot2globalsgluegowergtablehardhatipredisobanditeratorsKernSmoothlabelinglatticelavalifecyclelistenvlubridatemagrittrMASSMatrixModelMetricsnlmennetnumDerivparallellypillarpkgconfigplyrpROCprodlimprogressrproxypurrrR6RColorBrewerRcpprecipesreshape2rJavarlangrpartRWekaRWekajarsS7scalesshapesparsevctrsSQUAREMstringistringrsurvivaltibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithr