Package: varian 0.2.2
Joshua F. Wiley
varian: Variability Analysis in R
Uses a Bayesian model to estimate the variability in a repeated measure outcome and use that as an outcome or a predictor in a second stage model.
Authors:
varian_0.2.2.tar.gz
varian_0.2.2.zip(r-4.7)varian_0.2.2.zip(r-4.6)varian_0.2.2.zip(r-4.5)
varian_0.2.2.tgz(r-4.6-any)varian_0.2.2.tgz(r-4.5-any)
varian_0.2.2.tar.gz(r-4.7-any)varian_0.2.2.tar.gz(r-4.6-any)
varian_0.2.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
varian/json (API)
| # Install 'varian' in R: |
| install.packages('varian', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/elkhartgroup/varian/issues
Last updated from:5006545a84 (on package/varian). Checks:9 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 220 | ||
| source / vignettes | OK | 246 | ||
| linux-release-x86_64 | OK | 222 | ||
| macos-release-arm64 | OK | 199 | ||
| macos-oldrel-arm64 | OK | 122 | ||
| windows-devel | OK | 182 | ||
| windows-release | OK | 178 | ||
| windows-oldrel | OK | 177 | ||
| wasm-release | OK | 136 |
Exports:empirical_pvalueparallel_stanparam_summaryres_gammarmssdrmssd_idrolling_diffrolling_diff_idsd_idsimulate_gvmvarianvm_diagnosticsvmp_plot
Dependencies:abindbackportsBHcallrcheckmateclicpp11descdistributionalfarverFormulagenericsggplot2gluegridExtragtableinlineisobandlabelinglifecycleloomagrittrMASSmatrixStatsnumDerivpillarpkgbuildpkgconfigposteriorprocessxpsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanS7scalesStanHeaderstensorAtibbleutf8vctrsviridisLitewithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculates an empirical p-value based on the data | empirical_pvalue |
| Estimate the parameters for a Gamma distribution | gamma_params |
| Wrapper for the stan function to parallelize chains | parallel_stan |
| Calculates summaries for a parameter | param_summary |
| nice formatting for p-values | pval_smartformat |
| Estimates the parameters of a Gamma distribution from SDs | res_gamma |
| Simulate a Gamma Variability Model | simulate_gvm |
| Calculate Initial Values for Stan VM Model | stan_inits |
| Variability Measures | by_id rmssd rmssd_id rolling_diff rolling_diff_id sd_id Variability_Measures |
| Variablity Analysis using a Bayesian Variability Model (VM) | varian-package varian |
| Plot diagnostics from a VM model | vm_diagnostics |
| Create a Stan class VM object | vm_stan |
| Plot the posterior distributions of the focal parameters from a VM model | vmp_plot |