Changes in version 0.8.1 (2026-10-02)                  

  - Fixed a bug in parse_concide().
  - Reduced the amount of warnings about possible model feature
    incompatibility discovered while parsing the model.

In the future, this feature analysis will issue warnings only when it is
a true conflict, not a possible conflict (e.g.: scheduled events
modifying species that are subject to conservation law experssions)

                 Changes in version 0.8.0 (2026-09-24)                  

  - Most output can be suppressed with a global option:
    options(uqsa.verbose=FALSE).
  - Objects of class errors seem to cause slow downs on windows when
    doing arithmetic, we now more carefully drop errors when a function
    doesn't need them.
  - Fixed some bugs related to extensions of shared libraries on windows
    (dll rather than so).

                        Changes in version 0.7.8                        

  - A new function abc_mcmc was introduced, it is a rewrite of the older
    ABCMCMC function, with different arguments.
  - New Kullback-Leibler divergence function: KLD which can serve as
    fallback if other packages are unavailable for KLD calculations.
  - made some examples smaller, and tests smaller so that they run
    faster.
  - fixed several small bugs.
  - removed most printing of messages, unless they are part of a warning
  - interactive calls to functions that do heavy work now print a
    progress bar.
  - examples, vignettes, and articles all restore par and option
    settings on completion.

                        Changes in version 0.7.1                        

Windows compatibility: all checks pass.

                        Changes in version 0.6.3                        

The way that we generate C code and how shared libraries are made has
changed. In the past we were aiming for a workflow, where a user would
have their model in a repository. This repository would have the
generated C code for their model as well, so that there was no need to
keep regenerating it. The same repository could have a copy of the model
in various formats such as mod, sbml, vf, etc.

However, these derived formats make it quite difficult to keep
everything synchronized and up to date. Therefore we consider it the
more common case that we frequently change the model TSV files and then
update the C code.

The model, once converted to an ODE or CME (for chemical master equation
type models) now has a field for the C file storage location and the
shlib function uses this field to compile the model to a shared library
(same directory). The path to the so file is also stored in the ODE or
CME object.

Many other changes have been made to improve convenience, as well es to
fix bugs.