This package is considered a duplicate. The official version of this package is found at:https://cran.r-universe.dev/scLink
Package: scLink 1.0.1

Wei Vivian Li
scLink: Inferring Functional Gene Co-Expression Networks from Single Cell Data
Uses statistical network modeling to understand the co-expression relationships among genes and to construct sparse gene co-expression networks from single-cell gene expression data.
Authors:
scLink_1.0.1.tar.gz
scLink_1.0.1.zip(r-4.7)scLink_1.0.1.zip(r-4.6)scLink_1.0.1.zip(r-4.5)
scLink_1.0.1.tgz(r-4.6-any)scLink_1.0.1.tgz(r-4.5-any)
scLink_1.0.1.tar.gz(r-4.7-any)scLink_1.0.1.tar.gz(r-4.6-any)
scLink_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
scLink/json (API)
| # Install 'scLink' in R: |
| install.packages('scLink', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cranhaven/cranhaven.r-universe.dev/issues
Last updated from:6dd21bfaee (on package/scLink). Checks:7 WARNING, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | WARNING | 111 | ||
| source / vignettes | OK | 178 | ||
| linux-release-x86_64 | WARNING | 179 | ||
| macos-release-arm64 | WARNING | 138 | ||
| macos-oldrel-arm64 | WARNING | 82 | ||
| windows-devel | WARNING | 136 | ||
| windows-release | WARNING | 72 | ||
| windows-oldrel | WARNING | 72 | ||
| wasm-release | OK | 88 |
Exports:sclink_corsclink_netsclink_norm
Dependencies:glasso
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Calculate scLink's correlation matrix | sclink_cor |
| Infer gene co-expression networks | sclink_net |
| Pre-process data for scLink | sclink_norm |