# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "preseqR" in publications use:'
type: software
license: GPL-3.0-only
title: 'preseqR: Predicting Species Accumulation Curves'
version: 4.0.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.preseqR
abstract: Originally as an R version of Preseq <https://doi.org/10.1038/nmeth.2375>,
  the package has extended its functionality to predict the r-species accumulation
  curve (r-SAC), which is the number of species represented at least r times as a
  function of the sampling effort. When r = 1, the curve is known as the species accumulation
  curve, or the library complexity curve in high-throughput genomic sequencing. The
  package includes both parametric and nonparametric methods, as described by Deng
  C, et al. (2018) <arXiv:1607.02804v3>.
authors:
- family-names: Deng
  given-names: Chao
  email: chaodeng@usc.edu
- family-names: Daley
  given-names: Timothy
- family-names: Smith
  given-names: Andrew D.
preferred-citation:
  type: article
  title: Applications of species accumulation curves in large-scale biological data
    analysis
  authors:
  - family-names: Deng
    given-names: Chao
    email: chaodeng@usc.edu
  - family-names: Daley
    given-names: Timothy
  - family-names: Smith
    given-names: Andrew D.
  journal: Quantitative Biology
  year: '2015'
  volume: '3'
  issue: '3'
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4885658
  start: '135'
  end: '144'
repository: https://cranhaven.r-universe.dev
commit: 4ff2a7ec64a8d5e5644d21fa9be6b8b9fea8e795
date-released: '2018-06-27'
contact:
- family-names: Deng
  given-names: Chao
  email: chaodeng@usc.edu
references:
- type: article
  title: Estimating the number of species to attain sufficient representation in a
    random sample
  authors:
  - family-names: Deng
    given-names: Chao
  - family-names: Daley
    given-names: Timothy
  - family-names: Calabrese
    given-names: Peter
  - family-names: Ren
    given-names: Jie
  - family-names: Smith
    given-names: Andrew D.
  journal: arXiv
  year: '2018'
  url: https://arxiv.org/abs/1607.02804v3