Package: incubate
Title: Parametric Time-to-Event Analysis with Variable Incubation
        Phases
Version: 1.4.1
Date: 2026-06-04
Authors@R: 
    person(given = "Matthias", family = "Kuhn",
           role = c("aut", "cre", "cph"),
           email = "matthias.kuhn@tu-dresden.de",
           comment = c(ORCID = "0000-0003-2868-5155"))
Description: Fit parametric models for time-to-event data that show an
        initial 'incubation period', i.e. a variable delay phase where
        no events occur. The delayed Weibull distribution serves as the
        foundational data model. For parameter estimation, different
        flavours of maximum likelihood estimation ('MLE') and the
        method of maximum product of spacings estimation ('MPSE') are
        implemented. Bootstrap confidence intervals for parameters and
        significance tests in a two group setting are provided.
License: LGPL (>= 3)
Encoding: UTF-8
LazyData: true
Imports: future (>= 1.21), future.apply (>= 1.6), glue (>= 1.4), MASS,
        minqa, purrr (>= 0.3), rlang (>= 0.4), stats, survival, tibble
Suggests: boot, dplyr, future.callr, ggplot2 (>= 3.3), knitr, numDeriv,
        patchwork, rmarkdown, spelling, testthat (>= 3.0.0), tidyr,
        withr
URL: https://gitlab.com/imb-dev/incubate/
BugReports: https://gitlab.com/imb-dev/incubate/-/work_items
Language: en-GB
Config/roxygen2/version: 8.0.0
Config/roxygen2/markdown: TRUE
Config/testthat/edition: 3
Config/Needs/check: spelling
Depends: R (>= 3.6.0)
Collate: 'S3_integration.R' 'aaa.R' 'cpp11.R' 'data.R' 'utils.R'
        'delay_estimation.R' 'delay.R' 'delay_test.R'
        'incubate-package.R' 'zzz.R'
VignetteBuilder: knitr
LinkingTo: cpp11
NeedsCompilation: yes
Packaged: 2026-09-27 18:41:15 UTC; root
Author: Matthias Kuhn [aut, cre, cph] (ORCID:
        <https://orcid.org/0000-0003-2868-5155>)
Maintainer: Matthias Kuhn <matthias.kuhn@tu-dresden.de>
Config/pak/sysreqs: make
Repository: https://cranhaven.r-universe.dev
Date/Publication: 2026-09-27 11:02:00 UTC
RemoteUrl: https://github.com/cranhaven/cranhaven.r-universe.dev
RemoteRef: package/incubate
RemoteSha: 2473c9ef3617587056cd37a74466ed48da3b09d4
RemoteSubdir: incubate