{
  "_id": "6a101896acfb0bcc41c857cb",
  "Package": "scLink",
  "Title": "Inferring Functional Gene Co-Expression Networks from Single\nCell Data",
  "Version": "1.0.1",
  "Authors@R": "person(given = \"Wei Vivian\",\nfamily = \"Li\",\nrole = c(\"aut\", \"cre\"),\nemail = \"vivian.li@rutgers.edu\",\ncomment = c(ORCID = \"0000-0002-2087-2709\"))",
  "Description": "Uses statistical network modeling to understand the\nco-expression relationships among genes and to construct sparse\ngene co-expression networks from single-cell gene expression\ndata.",
  "License": "GPL-3",
  "VignetteBuilder": "knitr",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.0.2",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-14 19:41:06 UTC",
    "User": "root"
  },
  "Author": "Wei Vivian Li [aut, cre]\n(<https://orcid.org/0000-0002-2087-2709>)",
  "Maintainer": "Wei Vivian Li <vivian.li@rutgers.edu>",
  "Repository": "https://cranhaven.r-universe.dev",
  "Date/Publication": "2026-05-14 14:02:00 UTC",
  "RemoteUrl": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "RemoteRef": "package/scLink",
  "RemoteSha": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
  "RemoteSubdir": "scLink",
  "MD5sum": "d1d555a3bc74b67747ee32ef8188ae5f",
  "_user": "cranhaven",
  "_type": "src",
  "_file": "scLink_1.0.1.tar.gz",
  "_fileid": "a45e65b02c52bbbb39e3deba2c560c535d537356f421dd492ba50bc43abfc353",
  "_filesize": 4657365,
  "_sha256": "a45e65b02c52bbbb39e3deba2c560c535d537356f421dd492ba50bc43abfc353",
  "_created": "2026-05-14T19:41:06.000Z",
  "_published": "2026-05-22T08:49:26.087Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 77346865618,
      "time": 111,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7003231241"
    },
    {
      "job": 77346866275,
      "time": 179,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7003255475"
    },
    {
      "job": 77346865964,
      "time": 82,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7003419490"
    },
    {
      "job": 77346865848,
      "time": 138,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7003437751"
    },
    {
      "job": 77346865524,
      "time": 178,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7003192666"
    },
    {
      "job": 77346865222,
      "time": 88,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7156527988"
    },
    {
      "job": 77346865688,
      "time": 136,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7003238985"
    },
    {
      "job": 77346865774,
      "time": 72,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7003218217"
    },
    {
      "job": 77346866075,
      "time": 72,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7003219829"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "_commit": {
    "id": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
    "author": "GitHub Action <action@github.com>",
    "committer": "GitHub Action <action@github.com>",
    "message": "Add scLink to CRANhaven, because archived on 2026-05-14 14:02:00 +0000\n",
    "time": 1778767320
  },
  "_maintainer": {
    "name": "Wei Vivian Li",
    "email": "vivian.li@rutgers.edu",
    "orcid": "0000-0002-2087-2709"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "parallel",
      "role": "Depends"
    },
    {
      "package": "glasso",
      "role": "Depends"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "cranhaven",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-20",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "archived",
    "packages",
    "r-universe"
  ],
  "_stars": 5,
  "_contributors": [
    {
      "user": "henrikbengtsson",
      "count": 183,
      "uuid": 1616850
    }
  ],
  "_userbio": {
    "uuid": 161993010,
    "type": "organization",
    "name": "cranhaven",
    "description": "CRANhaven - Repository for Recently Archived CRAN Packages"
  },
  "_downloads": {
    "count": 197,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/scLink"
  },
  "_mentions": 1,
  "_devurl": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "_searchresults": 10,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/scLink.html",
    "manual.pdf"
  ],
  "_realowner": "cran",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2020-07-28"
    },
    {
      "version": "1.0.1",
      "date": "2020-08-26"
    }
  ],
  "_exports": [
    "sclink_cor",
    "sclink_net",
    "sclink_norm"
  ],
  "_help": [
    {
      "page": "sclink_cor",
      "title": "Calculate scLink's correlation matrix",
      "topics": [
        "sclink_cor"
      ]
    },
    {
      "page": "sclink_net",
      "title": "Infer gene co-expression networks",
      "topics": [
        "sclink_net"
      ]
    },
    {
      "page": "sclink_norm",
      "title": "Pre-process data for scLink",
      "topics": [
        "sclink_norm"
      ]
    }
  ],
  "_rundeps": [
    "glasso"
  ],
  "_vignettes": [
    {
      "source": "scLink-vignette.Rmd",
      "filename": "scLink-vignette.html",
      "title": "Introduction to scLink",
      "author": "Wei Vivian Li, Rutgers Department of Biostatistics and Epidemiology",
      "engine": "knitr::rmarkdown",
      "headings": [
        "sclink_norm",
        "sclink_net",
        "sclink_cor"
      ],
      "created": "2026-05-14 14:02:00",
      "modified": "2026-05-14 14:02:00",
      "commits": 1
    }
  ],
  "_score": 2.6989700043360187,
  "_indexed": false,
  "_nocasepkg": "sclink",
  "_universes": [
    "cranhaven"
  ],
  "_indexurl": "https://cran.r-universe.dev/scLink",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.1",
      "date": "2026-05-14T19:43:00.000Z",
      "distro": "noble",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "dbb9321581b7f0aa8254da0e876b8fdf84ead5b9549697793bca3cdc46f22bdb",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0.1",
      "date": "2026-05-14T19:44:16.000Z",
      "distro": "noble",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "b92fc3aaa5bf5dc055855e7a6567e679d2a5b29af19a212fa73ef3fffdd041d8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.1",
      "date": "2026-05-14T19:52:49.000Z",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "3c82e7284dea75aec56547788b7e1c73d62160b7e6758aac72cf21459e9ce06f",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0.1",
      "date": "2026-05-14T19:53:37.000Z",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "b163d812b7f85be519e91261e515d2204b2195d3e7a3b29a409d4d477a6b0a78",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.1",
      "date": "2026-05-14T19:43:19.000Z",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "bf5366aef9454fd2443668e1575421e77945ea2d0c7771a5a3b450f6dfea9f6b",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.1",
      "date": "2026-05-14T19:42:17.000Z",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "ed836160c29b6bfdd5a2cbc9f2f17590f36464cbb8b1da70b8c714af9a585dba",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0.1",
      "date": "2026-05-14T19:42:24.000Z",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "1903abd75fd1feaddaa0bb5eea473f79be6e92b2511e930ed86fe2c351819a23",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.1",
      "date": "2026-05-22T08:49:09.000Z",
      "commit": "6dd21bfaee71dc651d2c9d5a8825d6ae03d1a838",
      "fileid": "a79bb2af4e748f893bdfc8e6645aa8f47936ad1c378250f7b800ff243272bb23",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/25881354836"
    }
  ]
}