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  "Title": "Calculation of Evolvability Parameters",
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  "Description": "Provides tools for calculating evolvability parameters\nfrom estimated G-matrices as defined in Hansen and Houle (2008)\n<doi:10.1111/j.1420-9101.2008.01573.x> and fits phylogenetic\ncomparative models that link the rate of evolution of a trait\nto the state of another evolving trait (see Hansen et al. 2021\nSystematic Biology <doi:10.1093/sysbio/syab079>). The package\nwas released with Bolstad et al. (2014)\n<doi:10.1098/rstb.2013.0255>, which contains some examples of\nuse.",
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    "responsediffBeta",
    "round_and_format",
    "simulate_rate"
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    {
      "page": "evolvability-package",
      "title": "Calculation of Evolvability Parameters",
      "topics": [
        "evolvability-package",
        "evolvability"
      ]
    },
    {
      "page": "Almer",
      "title": "Linear mixed model with correlated random effects structure",
      "topics": [
        "Almer"
      ]
    },
    {
      "page": "Almer_boot",
      "title": "Parametric bootstrap on 'Almer' model fit",
      "topics": [
        "Almer_boot"
      ]
    },
    {
      "page": "Almer_SE",
      "title": "Linear mixed model for response variables with uncertainty",
      "topics": [
        "Almer_SE"
      ]
    },
    {
      "page": "Almer_sim",
      "title": "Simulate responses from 'Almer' fit",
      "topics": [
        "Almer_sim"
      ]
    },
    {
      "page": "conditionalG",
      "title": "Computing a conditional sub-matrix of G",
      "topics": [
        "conditionalG"
      ]
    },
    {
      "page": "evolvabilityBeta",
      "title": "Calculate evolvability parameters along a set of selection gradients",
      "topics": [
        "evolvabilityBeta"
      ]
    },
    {
      "page": "evolvabilityBetaMCMC",
      "title": "Calculate posterior distribution of evolvability parameters from a set of selection gradients",
      "topics": [
        "evolvabilityBetaMCMC"
      ]
    },
    {
      "page": "evolvabilityBetaMCMC2",
      "title": "Calculate posterior distribution of evolvability parameters from a selection gradient estimated with uncertainty",
      "topics": [
        "evolvabilityBetaMCMC2"
      ]
    },
    {
      "page": "evolvabilityMeans",
      "title": "Calculate average evolvability parameters of a G-matrix",
      "topics": [
        "evolvabilityMeans"
      ]
    },
    {
      "page": "evolvabilityMeansMCMC",
      "title": "Calculate posterior distribution of average evolvability parameters of a G-matrix",
      "topics": [
        "evolvabilityMeansMCMC"
      ]
    },
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      "title": "Generalized least square",
      "topics": [
        "GLS"
      ]
    },
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      "title": "Macroevolutionary predictions",
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      "title": "Mean standardize a variance matrix",
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      ]
    },
    {
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      "title": "Mean standardize the posterior distribution of a G-matrix",
      "topics": [
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      ]
    },
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      "title": "Phylogenetic heritability",
      "topics": [
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      ]
    },
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      "title": "Plot of rate_gls object",
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      "title": "Plot of simulate_rate object",
      "topics": [
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      "title": "Generating selection gradients/vectors in random directions.",
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      ]
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