{
  "_id": "6a2bf3c43efcd9bda42d11d2",
  "Package": "combinIT",
  "Type": "Package",
  "Title": "A Combined Interaction Test for Unreplicated Two-Way Tables",
  "Version": "2.0.1",
  "Authors@R": "c(\nperson(\"Zahra\", \"Shenavari\", email = \"zshenavari@yahoo.com\", role = \"aut\"),\nperson(\"Hossein\", \"Haghbin\", email = \"haghbin@pgu.ac.ir\",role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-8416-2354\")),\nperson(\"Mahmood\", \"Kharrati-Kopaei\", email = \"mkharati@shirazu.ac.ir\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-5555-253X\")),\nperson(\"Seyed Morteza\", \"Najibi\", email = \"mor.najibi@gmail.com\", role = \"aut\")\n)",
  "Maintainer": "Hossein Haghbin <haghbin@pgu.ac.ir>",
  "Description": "There are several non-functional-form-based interaction\ntests for testing interaction in unreplicated two-way layouts.\nHowever, no single test can detect all patterns of possible\ninteraction and the tests are sensitive to a particular pattern\nof interaction. This package combines six\nnon-functional-form-based interaction tests for testing\nadditivity. These six tests were proposed by Boik (1993)\n<doi:10.1080/02664769300000004>, Piepho (1994), Kharrati-Kopaei\nand Sadooghi-Alvandi (2007) <doi:10.1080/03610920701386851>,\nFranck et al. (2013) <doi:10.1016/j.csda.2013.05.002>, Malik et\nal. (2016) <doi:10.1080/03610918.2013.870196> and\nKharrati-Kopaei and Miller (2016)\n<doi:10.1080/00949655.2015.1057821>. The p-values of these six\ntests are combined by Bonferroni, Sidak, Jacobi polynomial\nexpansion, and the Gaussian copula methods to provide\nresearchers with a testing approach which leverages many\nexisting methods to detect disparate forms of non-additivity.\nThis package is based on the following published paper:\nShenavari and Kharrati-Kopaei (2018) \"A Method for Testing\nAdditivity in Unreplicated Two-Way Layouts Based on Combining\nMultiple Interaction Tests\". In addition, several sentences in\nhelp files or descriptions were copied from that paper.",
  "URL": "https://github.com/haghbinh/combinIT",
  "BugReports": "https://github.com/haghbinh/combinIT/issues",
  "License": "GPL (>= 2)",
  "Encoding": "UTF-8",
  "LazyData": "TRUE",
  "RoxygenNote": "7.3.2",
  "Config/testthat/edition": "3",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-12 11:49:10 UTC",
    "User": "root"
  },
  "Author": "Zahra Shenavari [aut], Hossein Haghbin [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-8416-2354>), Mahmood\nKharrati-Kopaei [aut] (ORCID:\n<https://orcid.org/0000-0001-5555-253X>), Seyed Morteza Najibi\n[aut]",
  "Repository": "https://cranhaven.r-universe.dev",
  "Date/Publication": "2026-06-12 02:02:00 UTC",
  "RemoteUrl": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "RemoteRef": "package/combinIT",
  "RemoteSha": "20e87d041384b44a8e3065c18c13a506f36f1177",
  "RemoteSubdir": "combinIT",
  "MD5sum": "b82da04fb8098f8c050c7328508fd5fd",
  "_user": "cranhaven",
  "_type": "src",
  "_file": "combinIT_2.0.1.tar.gz",
  "_fileid": "ec80b13facdec6b1c4ef1c6221cf9f1127644a0e281ae239469ae9bdb5fd1ef8",
  "_filesize": 220660,
  "_sha256": "ec80b13facdec6b1c4ef1c6221cf9f1127644a0e281ae239469ae9bdb5fd1ef8",
  "_created": "2026-06-12T11:49:10.000Z",
  "_published": "2026-06-12T11:55:48.276Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 81021372301,
      "time": 164,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7590745600"
    },
    {
      "job": 81021372312,
      "time": 127,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7590733112"
    },
    {
      "job": 81021372307,
      "time": 164,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590744134"
    },
    {
      "job": 81021372325,
      "time": 126,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590732761"
    },
    {
      "job": 81021372250,
      "time": 122,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7590744821"
    },
    {
      "job": 81021372264,
      "time": 312,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7590801409"
    },
    {
      "job": 81021372259,
      "time": 95,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590770327"
    },
    {
      "job": 81021372255,
      "time": 164,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590744823"
    },
    {
      "job": 81020906277,
      "time": 176,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590691441"
    },
    {
      "job": 81021372196,
      "time": 104,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590725422"
    },
    {
      "job": 81021372213,
      "time": 123,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7590731576"
    },
    {
      "job": 81021372245,
      "time": 106,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7590726395"
    },
    {
      "job": 81021372286,
      "time": 109,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7590727093"
    }
  ],
  "_buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "_commit": {
    "id": "20e87d041384b44a8e3065c18c13a506f36f1177",
    "author": "GitHub Action <action@github.com>",
    "committer": "GitHub Action <action@github.com>",
    "message": "Add combinIT to CRANhaven, because archived on 2026-06-12 02:02:00 +0000\n",
    "time": 1781229720
  },
  "_maintainer": {
    "name": "Hossein Haghbin",
    "email": "haghbin@pgu.ac.ir",
    "login": "haghbinh",
    "twitter": "@haghbinh",
    "description": "",
    "uuid": 36113130,
    "orcid": "0000-0001-8416-2354"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "RcppArmadillo",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Suggests"
    },
    {
      "package": "Matrix",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "cranhaven",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-24",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "archived",
    "packages",
    "r-universe",
    "openblas",
    "cpp",
    "openmp"
  ],
  "_stars": 5,
  "_contributors": [
    {
      "user": "henrikbengtsson",
      "count": 183,
      "uuid": 1616850
    }
  ],
  "_userbio": {
    "uuid": 161993010,
    "type": "organization",
    "name": "cranhaven",
    "description": "CRANhaven - Repository for Recently Archived CRAN Packages"
  },
  "_downloads": {
    "count": 239,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/combinIT"
  },
  "_devurl": "https://github.com/haghbinh/combinit",
  "_searchresults": 6,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/combinIT.html",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/haghbinh/combinit",
  "_realowner": "haghbinh",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2022-03-21"
    },
    {
      "version": "1.5.0",
      "date": "2022-06-17"
    },
    {
      "version": "2.0.0",
      "date": "2022-10-21"
    },
    {
      "version": "2.0.1",
      "date": "2025-10-20"
    }
  ],
  "_exports": [
    "Boik_test",
    "CI_test",
    "Franck_test",
    "interaction_plot",
    "KKM_test",
    "KKSA_test",
    "Malik_test",
    "Piepho_test"
  ],
  "_datasets": [
    {
      "name": "CNV",
      "title": "Copy number variation (CNV).",
      "object": "CNV",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 6,
      "table": true,
      "tojson": true
    },
    {
      "name": "IDCP",
      "title": "Impurity data in a chemical product (IDCP).",
      "object": "IDCP",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 5,
      "table": true,
      "tojson": true
    },
    {
      "name": "MVGH",
      "title": "The mean values of growth hormone (MVGH).",
      "object": "MVGH",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 3,
      "table": true,
      "tojson": true
    },
    {
      "name": "RDWW",
      "title": "Ratio of dry to wet wheat (RDWW).",
      "object": "RDWW",
      "class": [
        "matrix",
        "array"
      ],
      "fields": {},
      "rows": 4,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "Boik_test",
      "title": "Boik's (1993) Locally Best Invariant (LBI) Test",
      "topics": [
        "Boik_test"
      ]
    },
    {
      "page": "CI_test",
      "title": "Combined Interaction Test",
      "topics": [
        "CI_test"
      ]
    },
    {
      "page": "CNV",
      "title": "Copy number variation (CNV).",
      "topics": [
        "CNV"
      ]
    },
    {
      "page": "Franck_test",
      "title": "Franck's (2013) et al. test for Interaction",
      "topics": [
        "Franck_test"
      ]
    },
    {
      "page": "IDCP",
      "title": "Impurity data in a chemical product (IDCP).",
      "topics": [
        "IDCP"
      ]
    },
    {
      "page": "interaction_plot",
      "title": "Interaction Plot",
      "topics": [
        "interaction_plot"
      ]
    },
    {
      "page": "KKM_test",
      "title": "Kharrati-Kopaei and Miller's (2016) Test for Interaction",
      "topics": [
        "KKM_test"
      ]
    },
    {
      "page": "KKSA_test",
      "title": "Kharrati-Kopaei and Sadooghi-Alvandi's (2007) test for interaction",
      "topics": [
        "KKSA_test"
      ]
    },
    {
      "page": "Malik_test",
      "title": "Malik's (2016) et al. Test for Interaction",
      "topics": [
        "Malik_test"
      ]
    },
    {
      "page": "MVGH",
      "title": "The mean values of growth hormone (MVGH).",
      "topics": [
        "MVGH"
      ]
    },
    {
      "page": "Piepho_test",
      "title": "Piepho's (1994) Test for Interaction",
      "topics": [
        "Piepho_test"
      ]
    },
    {
      "page": "RDWW",
      "title": "Ratio of dry to wet wheat (RDWW).",
      "topics": [
        "RDWW"
      ]
    }
  ],
  "_readme": "https://github.com/cranhaven/cranhaven.r-universe.dev/raw/package/combinIT/combinIT/README.md",
  "_rundeps": [
    "mvtnorm",
    "Rcpp",
    "RcppArmadillo"
  ],
  "_sysdeps": [
    {
      "shlib": "liblapack",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libblas",
      "package": "libopenblas0-pthread",
      "source": "openblas",
      "version": "0.3.26+ds-1ubuntu0.1",
      "name": "openblas",
      "homepage": "https://www.openblas.net/",
      "description": "Optimized BLAS (linear algebra) library (shared lib, pthread)"
    },
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    },
    {
      "shlib": "libgomp",
      "package": "libgomp1",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "openmp",
      "homepage": "http://gcc.gnu.org/",
      "description": "GCC OpenMP (GOMP) support library"
    }
  ],
  "_score": 2.3979400086720375,
  "_indexed": false,
  "_nocasepkg": "combinit",
  "_universes": [
    "cranhaven"
  ],
  "_indexurl": "https://haghbinh.r-universe.dev/combinIT",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.0.1",
      "date": "2026-06-12T11:52:07.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "db850b1100dd97344493902038521699b6161f66ab9df49dc41a9050b37be6bd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.0.1",
      "date": "2026-06-12T11:51:24.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "781fa1d17702e228ccc012c94602780664138b8a285c59b87477a103dff06d5d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.0.1",
      "date": "2026-06-12T11:52:01.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "1df11483ccfdbbb36245878d6db65b0c7cbef8fc1b61f4cb4db24b6f1eb407c0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.0.1",
      "date": "2026-06-12T11:51:24.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "ce5a090c5886e47b4a7350213faa0cec4cea9281309e282bfa0f96ee0816e78b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.0.1",
      "date": "2026-06-12T11:51:55.000Z",
      "arch": "aarch64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "d18509165a06e029bddb955ee34b09a595fa9c31ae5f12b0e310b4fac7ffe073",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.0.1",
      "date": "2026-06-12T11:54:21.000Z",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "856d26cdf00205260c2148ba1a056a6e3e872c758653d0393c93593be296a90f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.0.1",
      "date": "2026-06-12T11:53:28.000Z",
      "arch": "aarch64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "39400a64bba140d7294a80c0e95db87486f5a272e8e825500b0738b2bfaeffc3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.0.1",
      "date": "2026-06-12T11:51:49.000Z",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "df2b2e776d6b780066dff6c6cca4d8146419d153528a41a421bded7b239e2ea0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.0.1",
      "date": "2026-06-12T11:51:19.000Z",
      "arch": "emscripten",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "1c6d3bb1c9227beb03d401648f2b29c848930b5c1938b877db13c862f4c819ca",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2.0.1",
      "date": "2026-06-12T11:50:47.000Z",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "9eb9a151744f5d1f8121e35830e745a62941b31d32393a6b995c882a14635ae1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2.0.1",
      "date": "2026-06-12T11:50:37.000Z",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "e3f8c8b2300edf531a905994d869ce27df71031ed33cad1205159d413eeccdc9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2.0.1",
      "date": "2026-06-12T11:50:37.000Z",
      "arch": "x86_64",
      "commit": "20e87d041384b44a8e3065c18c13a506f36f1177",
      "fileid": "d58adf224edd2a0dfb1b6812479f3b6bd1d6a4bc30fddf332a95243c782a5bde",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/27413655380"
    }
  ]
}