{
  "_id": "6acd7503a14063b82c3abcef",
  "Package": "PAS",
  "Type": "Package",
  "Title": "Polygenic Analysis System (PAS)",
  "Version": "1.2.5",
  "Date": "2018-06-13",
  "Author": "Zhiqiu Hu; Shizhong Xu; Zhiquan Wang; Rongcai Yang",
  "Maintainer": "Zhiqiu Hu <zhiqiu.hu@gmail.com>",
  "Description": "An R package for polygenic trait analysis.",
  "License": "GPL (>= 2)",
  "URL": "http://statgen.ucr.edu, http://www.ualberta.ca/~zhiqiu1",
  "RoxygenNote": "6.0.1",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-12 23:15:07 UTC",
    "User": "root"
  },
  "Repository": "https://cranhaven.r-universe.dev",
  "Date/Publication": "2026-10-12 09:02:00 UTC",
  "RemoteUrl": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "RemoteRef": "package/PAS",
  "RemoteSha": "370b575695c0d31ca8b356f538a65f57785e78b5",
  "RemoteSubdir": "PAS",
  "_user": "cranhaven",
  "_type": "src",
  "_file": "PAS_1.2.5.tar.gz",
  "_fileid": "https://r2.ropensci.org/318e6ae5ff45ac946abbf3f6146eeb5944150ab896189162599c53dc073a98d0",
  "_filesize": 164145,
  "_sha256": "318e6ae5ff45ac946abbf3f6146eeb5944150ab896189162599c53dc073a98d0",
  "_expires": "2027-01-21T00:02:08.000Z",
  "_created": "2026-10-12T23:15:07.000Z",
  "_published": "2026-10-13T00:02:11.023Z",
  "_buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_jobs": [
    {
      "job": 115049367886,
      "time": 108,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11778992487"
    },
    {
      "job": 115049368029,
      "time": 145,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11778963915"
    },
    {
      "job": 115049367864,
      "time": 139,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "11780212517"
    },
    {
      "job": 115049367942,
      "time": 105,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11780696346"
    },
    {
      "job": 115048477545,
      "time": 184,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11779118025"
    },
    {
      "job": 115049368032,
      "time": 78,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11778658905"
    },
    {
      "job": 115049368001,
      "time": 86,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11778497734"
    },
    {
      "job": 115049367962,
      "time": 101,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "11778902493"
    },
    {
      "job": 115049367913,
      "time": 79,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11778284461"
    }
  ],
  "_upstream": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "_commit": {
    "id": "370b575695c0d31ca8b356f538a65f57785e78b5",
    "author": "GitHub Action <action@github.com>",
    "committer": "GitHub Action <action@github.com>",
    "message": "Add PAS to CRANhaven, because archived on 2026-10-12 09:02:00 +0000\n",
    "time": 1791795720
  },
  "_maintainer": {
    "name": "Zhiqiu Hu",
    "email": "zhiqiu.hu@gmail.com",
    "login": "zhiqiuhu",
    "description": "",
    "uuid": 11523367
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "glmnet",
      "role": "Depends"
    }
  ],
  "_owner": "cranhaven",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-42",
      "n": 1
    }
  ],
  "_tags": [],
  "_topics": [
    "archived",
    "packages",
    "r-universe"
  ],
  "_stars": 5,
  "_contributors": [
    {
      "user": "henrikbengtsson",
      "count": 183,
      "uuid": 1616850
    }
  ],
  "_userbio": {
    "uuid": 161993010,
    "type": "organization",
    "name": "cranhaven",
    "followers": 3,
    "description": "CRANhaven - Repository for Recently Archived CRAN Packages"
  },
  "_downloads": {
    "count": 224,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/PAS"
  },
  "_mentions": 178,
  "_devurl": "https://github.com/cranhaven/cranhaven.r-universe.dev",
  "_searchresults": 7,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/PAS.html"
  ],
  "_realowner": "zhiqiuhu",
  "_cranurl": false,
  "_releases": [
    {
      "version": "1.0",
      "date": "2012-08-11"
    },
    {
      "version": "1.1",
      "date": "2012-11-20"
    },
    {
      "version": "1.2",
      "date": "2013-08-13"
    },
    {
      "version": "1.2.5",
      "date": "2018-06-13"
    }
  ],
  "_exports": [
    "binmod",
    "plot.binmod",
    "predict.binmod",
    "print.binmod"
  ],
  "_datasets": [
    {
      "name": "map",
      "title": "beef data",
      "object": "beef",
      "file": "beef.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "chr",
        "pos"
      ],
      "rows": 300,
      "table": true,
      "tojson": true
    },
    {
      "name": "x",
      "title": "beef data",
      "object": "beef",
      "file": "beef.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [],
      "rows": 836,
      "table": true,
      "tojson": true
    },
    {
      "name": "y",
      "title": "beef data",
      "object": "beef",
      "file": "beef.rda",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [],
      "rows": 836,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "PAS-package",
      "title": "Polygenic Analysis System (PAS)",
      "topics": [
        "PAS"
      ]
    },
    {
      "page": "plot.binmod",
      "title": "plot function",
      "topics": [
        "binmod.plot",
        "PAS.binmod.plot",
        "plot",
        "plot.binmod"
      ]
    },
    {
      "page": "predict.binmod",
      "title": "predict",
      "topics": [
        "binmod.predict",
        "PAS.binmod.predict",
        "predict",
        "predict.binmod"
      ]
    },
    {
      "page": "binmod",
      "title": "binmod",
      "topics": [
        "binmod",
        "PAS.binmod"
      ]
    },
    {
      "page": "beef",
      "title": "beef data",
      "topics": [
        "data",
        "map",
        "PAS.binmod.beef",
        "x",
        "y"
      ]
    },
    {
      "page": "print.binmod",
      "title": "binmod.print",
      "topics": [
        "binmod.print",
        "PAS.binmod.print",
        "print",
        "print.binmod"
      ]
    }
  ],
  "_rundeps": [
    "codetools",
    "foreach",
    "glmnet",
    "iterators",
    "lattice",
    "Matrix",
    "Rcpp",
    "RcppEigen",
    "shape",
    "survival"
  ],
  "_score": 2.6989700043360187,
  "_indexed": false,
  "_nocasepkg": "pas",
  "_universes": [
    "cranhaven"
  ],
  "_indexurl": "https://zhiqiuhu.r-universe.dev/PAS",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.2.5",
      "date": "2026-10-12T23:18:52.000Z",
      "distro": "resolute",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/eef32c44216662aa5fc25b0d6355f1d34a7ab1e1a69a1ccce5cbd966cb4ccaf9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.2.5",
      "date": "2026-10-12T23:19:41.000Z",
      "distro": "resolute",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/c76a97c76f8bda9a566d3b946b8bc312908db5d9395cc5ef230d56aa95d8dbb7",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.2.5",
      "date": "2026-10-13T00:00:57.000Z",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/c23c92f6390347cf20a7d7acd1ad72c8cf5861537883249e5c77089c3e38d55a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.2.5",
      "date": "2026-10-13T00:01:22.000Z",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/7c0671621e77a1e6f6c7a76293d61703bdc1bcc3e1cba9c2a3230675a1732264",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.2.5",
      "date": "2026-10-12T23:19:01.000Z",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/a9a142c215b29bae8867e8a2cae4edf781159233e0005d461a3056b5b1ea0d67",
      "status": "success",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.2.5",
      "date": "2026-10-12T23:18:34.000Z",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/689343c8b7590f235a945f1ee0a73dc0d3efa74acd4774f15c5c41ef6c2bf81c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.2.5",
      "date": "2026-10-12T23:18:49.000Z",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/86031bd6545de6f59ad80b100c890e5f80a5f97f12c0fa320e7f23492a74e6f1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.2.5",
      "date": "2026-10-12T23:18:29.000Z",
      "commit": "370b575695c0d31ca8b356f538a65f57785e78b5",
      "fileid": "https://r2.ropensci.org/37783b0a3941febc0f10d513b657baca5444988b48b35be69ba729787e77e66f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/cranhaven/actions/runs/38320873760"
    }
  ]
}