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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "aPEAR" in publications use:'
type: software
license: MIT
title: 'aPEAR: Advanced Pathway Enrichment Analysis Representation'
version: 1.0.0
doi: 10.1101/2023.03.28.534514
identifiers:
- type: doi
  value: 10.32614/CRAN.package.aPEAR
abstract: Simplify pathway enrichment analysis results by detecting clusters of similar
  pathways and visualizing it as an enrichment network, where nodes and edges describe
  the pathways and similarity between them, respectively. This reduces the redundancy
  of the overlapping pathways and helps to notice the most important biological themes
  in the data (Kerseviciute and Gordevicius (2023) <https://doi.org/10.1101/2023.03.28.534514>).
authors:
- family-names: Kerseviciute
  given-names: Ieva
  email: kerseviciute.ieva@gmail.com
  orcid: https://orcid.org/0000-0002-9353-038X
preferred-citation:
  type: article
  title: 'aPEAR: an R package for autonomous visualisation of pathway enrichment networks'
  authors:
  - family-names: Kerseviciute
    given-names: Ieva
    email: kerseviciute.ieva@gmail.com
    orcid: https://orcid.org/0000-0002-9353-038X
  - family-names: Gordevicius
    given-names: Juozas
  journal: BioRxiv
  year: '2023'
  doi: 10.1101/2023.03.28.534514
repository: https://cranhaven.r-universe.dev
repository-code: https://gitlab.com/vugene/aPEAR
commit: 06a6a87b8f76f53535ffdcee8591bee4cfc52a8a
url: https://gitlab.com/vugene/aPEAR
date-released: '2023-06-12'
contact:
- family-names: Kerseviciute
  given-names: Ieva
  email: kerseviciute.ieva@gmail.com
  orcid: https://orcid.org/0000-0002-9353-038X