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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "PlasmaMutationDetector2" in publications use:'
type: software
license: MIT
title: 'PlasmaMutationDetector2: Tumor Mutation Detection in Plasma using Barcoding'
version: 1.1.11
doi: 10.32614/CRAN.package.PlasmaMutationDetector2
abstract: Aims at detecting single nucleotide variation (SNV) and insertion/deletion
  (INDEL) in circulating tumor DNA (ctDNA), used as a surrogate marker for tumor,
  at each base position of an Next Generation Sequencing (NGS) analysis using barcoding.
  Mutations are assessed by comparing the minor-allele frequency at each position
  to the measured PER in control samples. This package has been used for Kjersti Tjensvoll,
  Morten Lapin, Bjørnar Gilje, Herish Garresori, Satu Oltedal, Rakel Brendsdal Forthun,
  Anders Molven, Yves Rozenholc and Oddmund N\oordgaard (2022) <https://www.nature.com/articles/s41598-022-09698-5>.
authors:
- name: Rozenholc
  email: yves.rozenholc@u-paris.fr
repository: https://cranhaven.r-universe.dev
commit: dbefabb5ae70f54f5a5d60a4e48076e778d14ffa
date-released: '2022-04-07'
contact:
- name: Rozenholc
  email: yves.rozenholc@u-paris.fr