Package: ErrorTracer 1.1.0
ErrorTracer: Bayesian Error Propagation and Forecast Uncertainty Decomposition
Provides a full pipeline from regularized or standard regression models (elastic net, linear models, generalized linear models, random forests) to informed Bayesian priors, structured forecast uncertainty decomposition (parameter / environmental / residual, plus a temporal component when the model carries an autocorrelation term), and forecast shelf life analysis (the quantification of when a forecast becomes uninformative). Designed for ecological and genomic forecasting with climate or environmental covariates. Methods build on Bürkner (2017) <doi:10.18637/jss.v080.i01> for Bayesian regression via 'Stan', Friedman, Hastie, and Tibshirani (2010) <doi:10.18637/jss.v033.i01> for elastic net regularization, Wright and Ziegler (2017) <doi:10.18637/jss.v077.i01> for random forests, and Vehtari, Gelman, and Gabry (2017) <doi:10.1007/s11222-016-9696-4> for leave-one-out cross-validation.
Authors:
ErrorTracer_1.1.0.tar.gz
ErrorTracer_1.1.0.zip(r-4.7)ErrorTracer_1.1.0.zip(r-4.6)ErrorTracer_1.1.0.zip(r-4.5)
ErrorTracer_1.1.0.tgz(r-4.6-any)ErrorTracer_1.1.0.tgz(r-4.5-any)
ErrorTracer_1.1.0.tar.gz(r-4.7-any)ErrorTracer_1.1.0.tar.gz(r-4.6-any)
ErrorTracer_1.1.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ErrorTracer/json (API)
NEWS
| # Install 'ErrorTracer' in R: |
| install.packages('ErrorTracer', repos = c('https://cranhaven.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cranhaven/cranhaven.r-universe.dev/issues
- et_sim - Simulated allele-frequency-change dataset for ErrorTracer tutorials
Last updated from:a61a0041e6 (on package/ErrorTracer). Checks:7 OK, 2 ERROR. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | OK | 168 | ||
| source / vignettes | OK | 216 | ||
| linux-release-x86_64 | OK | 172 | ||
| macos-release-arm64 | ERROR | 118 | ||
| macos-oldrel-arm64 | ERROR | 95 | ||
| windows-devel | OK | 154 | ||
| windows-release | OK | 122 | ||
| windows-oldrel | OK | 110 | ||
| wasm-release | OK | 144 |
Exports:decompose_uncertaintyet_calibrateet_diagnoseet_fitet_plot_calibrationet_plot_coefficientset_plot_decompositionet_plot_forecastet_plot_prior_posterioret_plot_sensitivityet_plot_shelf_lifeet_predictet_sensitivity_profileet_themeextract_priorsshelf_lifestandardizeunstandardize
Dependencies:abindbackportsbayesplotBHbridgesamplingbrmsBrobdingnagcallrcheckmateclicodacodetoolscpp11descdigestdistributionaldplyrfarverfuturefuture.applygenericsggplot2ggridgesglobalsgluegridExtragtableinlineisobandlabelinglatticelifecyclelistenvloomagrittrMatrixmatrixStatsmgcvmvtnormnleqslvnlmenumDerivotelparallellypillarpkgbuildpkgconfigplyrposteriorprocessxpspurrrQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelreshape2rlangrstanrstantoolsS7scalesStanHeadersstringistringrtensorAtibbletidyrtidyselectutf8vctrsviridisLitewithr
